Description

programmed cell death 2 [Source:HGNC Symbol;Acc:HGNC:8762]

Synonyms

RP8, ZMYND7

Gene

This transcript is a product of gene ENSG00000071994

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PDCD2-001ENST000005419703378 bp344 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5316F5H739 Q16342 NM_002598
NP_002589
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PDCD2-002ENST000004531632657 bp228 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47521E9PCU7 NM_144781
NP_659005
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PDCD2-004ENST000004433451897 bp195 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56460Q16342 NM_001199463
NP_001186392
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PDCD2-005ENST000005374451114 bp188 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56462F5GYS7 NM_001199464
NP_001186393
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PDCD2-007ENST00000392090936 bp311 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56461F5H739 Q16342 NM_001199462
NP_001186391
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PDCD2-201ENST000006140561287 bp221 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--NM_001199461
NP_001186390
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PDCD2-006ENST000005428961082 bp298 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H4V9 F5H739 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PDCD2-014ENST00000538195560 bp21 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H739 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PDCD2-003ENST000005443361164 bp99 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5GWT2 H0YFM2 H0YFZ5
-
PDCD2-009ENST000001672181118 bp221 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3QK82 -
PDCD2-010ENST00000545869900 bp99 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5GWT2 H0YFM2 H0YFZ5
-
PDCD2-012ENST00000544866710 bp35 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YFZ5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PDCD2-013ENST00000544755582 bp46 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YFM2 H0YFZ5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PDCD2-011ENST00000539212445 bp40 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YFM2 H0YFZ5 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PDCD2-008ENST000005432843255 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 7 Coding exons: 7 Transcript length: 936 bps Translation length: 311 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS56461

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16342

Ensembl version

ENST00000392090.3

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays