Description

POU class 1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9210]

Synonyms

GHF-1, PIT1, POU1F1a

Location
Gene

This transcript is a product of gene ENSG00000064835

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
POU1F1-001ENST000003503751491291 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2919P28069 POU1F1-001 NM_000306
NP_000297
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
POU1F1-002ENST000003442651149317 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS46873P28069 POU1F1-002 NM_001122757
NP_001116229
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POU1F1-004ENST00000561167650216 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YNM5 POU1F1-004 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

POU1F1-003ENST00000560656647169 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YK06 POU1F1-003 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 4 Coding exons: 4 Transcript length: 647 bps Translation length: 169 residues

Transcript Support Level

5

Ensembl version

ENST00000560656.1

Type

Novel protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays