Description

breast cancer 1, early onset [Source:HGNC Symbol;Acc:1100]

Location
Gene

This transcript is a product of gene ENSG00000012048

This gene has 31 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
BRCA1-001ENST000003576547094ENSP000003502831863Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11453YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-005ENST000004711815936ENSP000004189601884Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11456YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-006ENST000004937955732ENSP000004187751816Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11459YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-007ENST000004683003273ENSP00000417148699Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11455YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-014ENST000004917472379ENSP00000420705759Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11454YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-201ENST000003094867114ENSP000003109381567Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-202ENST000003463156451ENSP000002469071624Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-205ENST000003540716411ENSP000003260021598Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-204ENST000003529933780ENSP00000312236721Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-203ENST000003516663444ENSP00000338007680Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-011ENST000004700262108ENSP00000419274649Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-004ENST000004771521980ENSP00000419988622Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-009ENST000004785311972ENSP00000420412623Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-008ENST000004939191948ENSP00000418819572Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-013ENST000004941231612ENSP00000419103473Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-015ENST000004840871495ENSP00000419481498Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BRCA1-024ENST000005915341282ENSP00000467329354Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-018ENST00000473961958ENSP00000420201319Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BRCA1-019ENST00000487825800ENSP00000418212266Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BRCA1-023ENST00000586385781ENSP00000465818173Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-003ENST00000497488779ENSP00000418986177Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-017ENST00000476777769ENSP00000417554222Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-022ENST00000461574726ENSP00000417241242Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BRCA1-025ENST00000591849563ENSP0000046534796Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-016ENST00000489037455ENSP0000042078198Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-026ENST000004120611312ENSP00000397145437Non stop decay5'--
BRCA1-010ENST000004612215693ENSP0000041854863Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
BRCA1-002ENST000004928591584ENSP0000042025359Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
BRCA1-020ENST00000461798582ENSP0000041798863Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
BRCA1-012ENST000004672744497No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
BRCA1-021ENST00000472490561No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 23 Coding exons: 4 Transcript length: 5,693 bps Translation length: 63 residues

Ensembl version

ENST00000461221.1

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000348807 (version 1)

Transcript-based displays