Description

paired box 6 [Source:HGNC Symbol;Acc:8620]

Location
Gene

This transcript is a product of gene ENSG00000007372

This gene has 30 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
PAX6-201ENST000004190226922ENSP00000404100436Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31452YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-009ENST000003791292614ENSP00000368424436Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31452YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-011ENST000003791072591ENSP00000368401436Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31452YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-008ENST000003791322574ENSP00000368427422Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31451YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-003ENST000003791232160ENSP00000368418422Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31451YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-001ENST000003791151763ENSP00000368410436Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31452YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-002ENST000002410011631ENSP00000241001422Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31451YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-005ENST000003791111627ENSP00000368406422Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31451YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-004ENST000003791092157ENSP00000368403422Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PAX6-020ENST00000525535677ENSP000004363652Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PAX6-021ENST00000524853574ENSP0000043158558Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PAX6-012ENST00000423822567ENSP0000038813262Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PAX6-016ENST00000455099497ENSP00000397384124Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PAX6-013ENST00000438681455ENSP0000040435639Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PAX6-029ENST00000533156847No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PAX6-014ENST00000471303782No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
PAX6-027ENST00000531910643No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
PAX6-015ENST00000481563613No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
PAX6-028ENST00000530373572No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
PAX6-025ENST00000530714567No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
PAX6-024ENST00000534353540No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
PAX6-019ENST000005333336173No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PAX6-006ENST000004700272842No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PAX6-007ENST000004943772460No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PAX6-010ENST00000464174979No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PAX6-017ENST00000474783702No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PAX6-030ENST00000532916627No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PAX6-026ENST00000534390578No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PAX6-023ENST00000532175524No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PAX6-022ENST00000527769487No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 13 Coding exons: 10 Transcript length: 2,160 bps Translation length: 422 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS31451

Ensembl version

ENST00000379123.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000099288 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays