Description

replication protein A2, 32kDa [Source:HGNC Symbol;Acc:HGNC:10290]

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:27891524:27914746:1

About this gene

This gene has 5 transcripts (splice variants), 70 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 21 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RPA2-001ENST000003739121752270aaENSP00000363021
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS314P15927 NM_001286076
NM_002946
NP_001273005
NP_002937
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

RPA2-002ENST000003739091162278aaENSP00000363017
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS72740P15927 NM_001297558
NP_001284487
TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RPA2-004ENST000003134331237358aaENSP00000363015
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P15927 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RPA2-003ENST00000444045682179aaENSP00000387649
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5TEJ7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

RPA2-005ENST00000419958554122aaENSP00000413541
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5TEJ0 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays