Description

myeloid-derived growth factor [Source:HGNC Symbol;Acc:HGNC:16948]

Synonyms

C19orf10, IL-25, IL-27, IL25, IL27, IL27w, R33729_1, SF20

Location
INSDC coordinates

chromosome:GRCh38:CM000681.2:4641374:4670370:1

About this gene

This gene has 4 transcripts (splice variants), 50 orthologues and is a member of 2 Ensembl protein families.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MYDGF-001ENST000002629471018173aaENSP00000262947
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12133Q969H8 NM_019107
NP_061980
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
MYDGF-004ENST00000599630713189aaENSP00000469945
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0QYN0 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MYDGF-003ENST0000059976146384aaENSP00000469136
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-M0QXF7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

MYDGF-002ENST00000596031335No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays