Description

collagen, type XXV, alpha 1 [Source:HGNC Symbol;Acc:HGNC:18603]

Synonyms

INSDC coordinates

chromosome:GRCh38:CM000666.2:108810721:109302657:1

Transcripts

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
COL25A1-001ENST000003991322724 bp654 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43258D6R8Y2 Q9BXS0 NM_198721
NP_942014
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL25A1-002ENST000003991262674 bp642 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43259D6R8Y2 Q4W5I4 Q9BXS0
NM_032518
NP_115907
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL25A1-003ENST000003991272500 bp645 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58922A8MWQ5 D6R8Y2 NM_001256074
NP_001243003
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL25A1-202ENST000006221344819 bp494 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL25A1-201ENST000006102884799 bp333 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL25A1-005ENST00000505591428 bp70 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R8Y2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
COL25A1-007ENST00000512961316 bp29 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
COL25A1-004ENST000004941834630 bp496 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6R8Y2 E9PNV9 -
COL25A1-006ENST00000505377448 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays