Description

zinc finger and BTB domain containing 40 [Source:HGNC Symbol;Acc:HGNC:29045]

Synonyms

KIAA0478, ZNF923

Location
INSDC coordinates

chromosome:GRCh38:CM000663.2:22451851:22531157:1

About this gene

This gene has 4 transcripts (splice variants), 62 orthologues, is a member of 1 Ensembl protein family and is associated with 1 phenotype.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ZBTB40-202ENST0000040413889921239aaENSP00000384527
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS224Q9NUA8 NM_001083621
NP_001077090
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
ZBTB40-001ENST0000037564786851239aaENSP00000364798
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS224Q9NUA8 NM_014870
NP_055685
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
ZBTB40-201ENST0000037465183681127aaENSP00000363782
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8WAI8 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
ZBTB40-002ENST000004002391855453aaENSP00000383098
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKC8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays