Description

caudal type homeobox 2 [Source:HGNC Symbol;Acc:HGNC:1806]

Synonyms

CDX3

Location
INSDC coordinates

chromosome:GRCh38:CM000675.2:27962137:27971139:1

About this gene

This gene has 2 transcripts (splice variants), 57 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 38 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CDX2-001ENST000003810204053313aaENSP00000370408
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9328Q99626 NM_001265
NP_001256
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CDX2-002ENST00000548877581No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays