Description

HESX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4877]

Synonyms

ANF, RPX

Location
INSDC coordinates

chromosome:GRCh38:CM000665.2:57197843:57226521:1

About this gene

This gene has 3 transcripts (splice variants), 62 orthologues, 12 paralogues, is a member of 1 Ensembl protein family and is associated with 9 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HESX1-001ENST00000295934981185aaENSP00000295934
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2881A0A024R364 Q9UBX0 NM_003865
NP_003856
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

HESX1-002ENST00000473921757151aaENSP00000418918
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J0A9 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HESX1-003ENST00000495160657107aaENSP00000419615
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KR67 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays