Description

chemokine (C-X-C motif) ligand 13 [Source:HGNC Symbol;Acc:HGNC:10639]

Synonyms

ANGIE, ANGIE2, BCA-1, BLC, BLR1L, SCYB13

Location
INSDC coordinates

chromosome:GRCh38:CM000666.2:77511753:77611834:1

About this gene

This gene has 2 transcripts (splice variants), 32 orthologues, is a member of 1 Ensembl protein family and is associated with 22 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CXCL13-001ENST000002867581203109aaENSP00000286758
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3582O43927 Q53X90 NM_006419
NP_006410
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CXCL13-002ENST00000506590540No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays