Description

thyroid hormone receptor, beta [Source:HGNC Symbol;Acc:HGNC:11799]

Synonyms

ERBA-BETA, ERBA2, GRTH, NR1A2, PRTH, THR1, THRB1, THRB2

Location
INSDC coordinates

chromosome:GRCh38:CM000665.2:24117160:24495282:1

Transcripts



This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
THRB-201ENST000003966717506461 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2641C9JHC2 C9JJM3 C9JNQ4
C9JTN1 C9JZS5 F1D8N7
J3KR21 P10828
NM_001128176
NP_001121648
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
THRB-001ENST000003564476345461 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2641C9JHC2 C9JJM3 C9JNQ4
C9JTN1 C9JZS5 F1D8N7
J3KR21 P10828
NM_000461
NM_001128177
NP_000452
NP_001121649
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
THRB-004ENST000004164202571461 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2641C9JHC2 C9JJM3 C9JNQ4
C9JTN1 C9JZS5 F1D8N7
J3KR21 P10828
NM_001252634
NP_001239563
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
THRB-003ENST000002806961718476 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P10828 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
THRB-011ENST00000413780896132 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JNQ4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

THRB-006ENST00000447875754122 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JHC2 C9JJM3 C9JTN1
C9JZS5 J3KR21 P10828
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

THRB-002ENST00000453729703121 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JHC2 C9JJM3 C9JTN1
C9JZS5 J3KR21
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

THRB-005ENST00000415021671122 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JHC2 C9JJM3 C9JTN1
C9JZS5 J3KR21 P10828
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

THRB-012ENST0000041824759263 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JZS5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

THRB-010ENST00000447414575103 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JHC2 C9JTN1 C9JZS5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

THRB-008ENST00000431815568114 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JHC2 C9JJM3 C9JTN1
C9JZS5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

THRB-009ENST0000042849253967 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JHC2 C9JZS5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays