Description

aprataxin [Source:HGNC Symbol;Acc:HGNC:15984]

Synonyms

AOA, AOA1, AXA1, EAOH, EOAHA, FLJ20157

Location
INSDC coordinates

chromosome:GRCh38:CM000671.2:32972606:33025168:1

Transcripts

This gene has 33 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
APTX-203ENST000004360402168 bp342 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47956F5HRF8 Q7Z2E3 NM_001195249
NM_175073
NP_001182178
NP_778243
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-006ENST000004768581068 bp302 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56568C9J8U3 C9JZ40 Q7Z2E3
NM_001195250
NP_001182179
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-011ENST000003798172106 bp342 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5HRF8 Q7Z2E3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-002ENST000003798252023 bp306 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q7Z2E3 NM_001195251
NM_175069
NP_001182180
NP_778239
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-201ENST000003096151859 bp288 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J8U3 Q7Z2E3 NM_001195254
NP_001182183
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-003ENST000003798191820 bp356 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5HRF8 Q7Z2E3 NM_001195248
NP_001182177
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-021ENST000003971721740 bp284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W6G5 Q7Z2E3 NM_001195252
NP_001182181
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-017ENST000004682751455 bp342 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5HRF8 Q7Z2E3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-007ENST000004635961345 bp342 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5HRF8 Q7Z2E3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-202ENST000003798131121 bp336 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q7Z2E3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
APTX-025ENST00000473221687 bp216 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J8U3 C9JZ40 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
APTX-030ENST00000379812599 bp198 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W6G5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
APTX-026ENST00000477119568 bp155 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J8U3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
APTX-012ENST000004673312101 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q7Z2E3 -
APTX-009ENST000004946492099 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q7Z2E3 -
APTX-001ENST000004650031991 bp85 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q6JV79 -
APTX-010ENST000004854791986 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q7Z2E3 -
APTX-004ENST000004796561881 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q7Z2E3 -
APTX-015ENST000004826871879 bp192 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q7Z2E3 -
APTX-016ENST000004609401874 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q7Z2E3 -
APTX-014ENST000004831481764 bp85 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q6JV79 -
APTX-013ENST000004728961759 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q7Z2E3 -
APTX-008ENST000004953601313 bp49 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q7Z2E3 -
APTX-028ENST00000474658952 bp74 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
APTX-019ENST00000478279684 bp99 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E7EVB7 Q6JV79 -
APTX-018ENST00000464632679 bp63 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E7EUY4 -
APTX-027ENST00000480031674 bp52 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8WBD6 -
APTX-023ENST00000473270645 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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APTX-032ENST00000486724556 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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APTX-022ENST00000460945542 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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APTX-024ENST00000489583397 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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APTX-031ENST00000496030633 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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APTX-029ENST00000494973547 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays