Description

nuclear receptor subfamily 5, group A, member 1 [Source:HGNC Symbol;Acc:HGNC:7983]

Synonyms

AD4BP, ELP, FTZ1, FTZF1, SF-1

INSDC coordinates

chromosome:GRCh38:CM000671.2:124481236:124507430:1

About this gene

This gene has 4 transcripts (splice variants), 66 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 9 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
NR5A1-001ENST000003735883104461aaENSP00000362690
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6856F1D8R8 Q13285 NM_004959
NP_004950
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

NR5A1-201ENST000006201102975421aaENSP00000483309
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F1DAM0 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NR5A1-003ENST00000455734826178aaENSP00000393245
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5T6F6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

NR5A1-002ENST00000373587768245aaENSP00000362689
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5T6F7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays