Description

nuclear receptor subfamily 5, group A, member 1 [Source:HGNC Symbol;Acc:HGNC:7983]

Synonyms

AD4BP, ELP, FTZ1, FTZF1, SF-1

INSDC coordinates

chromosome:GRCh38:CM000671.2:124481236:124507430:1

Transcripts

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
NR5A1-001ENST000003735883104461 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6856F1D8R8 Q13285 Q5T6F6
Q6QGY2 Q9H3V4
NM_004959
NP_004950
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
NR5A1-201ENST000006201102975421 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F1DAM0 Q5T6F6 Q6QGY2
Q9H3V4
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NR5A1-003ENST00000455734826178 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5T6F6 Q6QGY2 Q9H3V4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

NR5A1-002ENST00000373587768245 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5T6F7 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays