Description

tetraspanin 2 [Source:HGNC Symbol;Acc:HGNC:20659]

Synonyms

FLJ12082, TSN2, TSPAN-2

INSDC coordinates

chromosome:GRCh38:CM000663.2:115048011:115089500:1

About this gene

This gene has 4 transcripts (splice variants), 75 orthologues, 10 paralogues, is a member of 1 Ensembl protein family and is associated with 55 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TSPAN2-001ENST000003695163177221aaENSP00000358529
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS881O60636 NM_005725
NP_005716
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

TSPAN2-002ENST00000369515793196aaENSP00000358528
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKP1 -TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TSPAN2-004ENST00000433172671187aaENSP00000415256
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKP2 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TSPAN2-003ENST00000491992464No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays