Description

B-cell CLL/lymphoma 11B (zinc finger protein) [Source:HGNC Symbol;Acc:HGNC:13222]

Synonyms

CTIP-2, CTIP2, hRIT1-alpha, ZNF856B

Location
INSDC coordinates

chromosome:GRCh38:CM000676.2:99169287:99271524:1

About this gene

This gene has 3 transcripts (splice variants), 55 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 173 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
BCL11B-002ENST000003455147603823aaENSP00000280435
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9949L8B567 Q9C0K0 NM_001282238
NM_022898
NP_001269167
NP_075049
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

BCL11B-001ENST000003571957559894aaENSP00000349723
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9950L8B7P7 Q9C0K0 NM_001282237
NM_138576
NP_001269166
NP_612808
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P4

PRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

BCL11B-003ENST000004437262599700aaENSP00000387419
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTK1 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Gene-based displays