Description

opsin 4 [Source:HGNC Symbol;Acc:HGNC:14449]

Synonyms

melanopsin, MOP

Location
INSDC coordinates

chromosome:GRCh38:CM000672.2:86654557:86666848:1

About this gene

This gene has 3 transcripts (splice variants), 83 orthologues, 9 paralogues, is a member of 1 Ensembl protein family and is associated with 101 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
OPN4-201ENST000003720712401489aaENSP00000361141
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31237Q9UHM6 NM_001030015
NP_001025186
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
OPN4-001ENST000002418912308478aaENSP00000241891
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7376Q9UHM6 NM_033282
NP_150598
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
OPN4-002ENST000004432921653495aaENSP00000393132
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JWU6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays