Description

solute carrier family 6 (neurotransmitter transporter), member 4 [Source:HGNC Symbol;Acc:HGNC:11050]

Synonyms

5-HTT, HTT, OCD1, SERT1

Location
INSDC coordinates

chromosome:GRCh38:CM000679.2:30194319:30236002:1

Transcripts

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SLC6A4-201ENST000002617076604 bp630 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11256B3VRQ0 B3VRQ5 B3VRR0
B3VRR5 B3VRS0 B3VRS5
B3VRU0 B3VRU5 B3VRV0
B3VRV5 B3VRW0 J3KPR9
P31645 Q9NYN7
NM_001045
NP_001036
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SLC6A4-002ENST000004017666543 bp630 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11256B3VRQ0 B3VRQ5 B3VRR0
B3VRR5 B3VRS0 B3VRS5
B3VRU0 B3VRU5 B3VRV0
B3VRV5 B3VRW0 J3KPR9
P31645 Q9NYN7
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SLC6A4-001ENST000003948212160 bp618 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B3VRQ0 B3VRQ5 B3VRR0
B3VRR5 B3VRS0 B3VRS5
B3VRU0 B3VRV0 B3VRV5
B3VRW0 J3KPR9 Q9NYN7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SLC6A4-003ENST000005792211069 bp72 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-B3VRQ0 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SLC6A4-004ENST00000578609566 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---

Gene-based displays