Description

SAM domain and HD domain 1 [Source:HGNC Symbol;Acc:HGNC:15925]

Synonyms

AGS5, HDDC1, Mg11, MOP-5, SBBI88

Location
INSDC coordinates

chromosome:GRCh38:CM000682.2:36890229:36951843:1

About this gene

This gene has 2 transcripts (splice variants), 76 orthologues, is a member of 1 Ensembl protein family and is associated with 5 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SAMHD1-001ENST000002628784784626aaENSP00000262878
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13288Q9Y3Z3 NM_015474
NP_056289
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

SAMHD1-002ENST00000465985516No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays