Description

synaptosomal-associated protein, 29kDa [Source:HGNC Symbol;Acc:HGNC:11133]

Synonyms

CEDNIK, SNAP-29

Location
INSDC coordinates

chromosome:GRCh38:CM000684.2:20858983:20891218:1

About this gene

This gene has 3 transcripts (splice variants), 63 orthologues, is a member of 1 Ensembl protein family and is associated with 3 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SNAP29-001ENST000002157304287258aaENSP00000215730
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13784O95721 NM_004782
NP_004773
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SNAP29-003ENST00000439214681160aaENSP00000411095
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JAF7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SNAP29-002ENST00000490458972No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays