Description

collagen, type V, alpha 3 [Source:HGNC Symbol;Acc:HGNC:14864]

Location
INSDC coordinates

chromosome:GRCh38:CM000681.2:9959561:10010471:1

About this gene

This gene has 2 transcripts (splice variants), 61 orthologues, 17 paralogues, is a member of 1 Ensembl protein family and is associated with 384 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
COL5A3-001ENST0000026482861741745aaENSP00000264828
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS12222P25940 NM_015719
NP_056534
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

COL5A3-002ENST00000461214828No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays