Transcript: ENSGALT00010054679.1 VCL-201

Description

vinculin [Source:NCBI gene (formerly Entrezgene);Acc:396422]

Location

About this transcript

This transcript has 21 exons, is annotated with 35 domains and features, is associated with 2131 variant alleles and maps to 40 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010054688.1	VCL-202	6031	1135aa	ENSGALP00010033042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P12003	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010054689.1	VCL-203	5827	1067aa	ENSGALP00010033043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010054679.1	VCL-201	5531	1018aa	ENSGALP00010033035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010054683.1	VCL-204	1165	94aa	ENSGALP00010033037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 5,531 bps, Translation length: 1,018 residues

Version

ENSGALT00010054679.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.