Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL6A5 ENSECAG00000012733

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Description

collagen type VI alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:26674]

Location

Primary_assembly 16: 67,999,023-68,129,758 forward strand.

EquCab3.0:CM009163.1

About this gene

This gene has 4 transcripts (splice variants), 147 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000016599.4	COL6A5-204	9030	2614aa	ENSECAP00000013409.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6W5N9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000131424.1	COL6A5-203	8629	2528aa	ENSECAP00000060383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000047402.3	COL6A5-201	8480	2500aa	ENSECAP00000027474.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2H1S6	-
ENSECAT00000013245.4	COL6A5-202	8366	2462aa	ENSECAP00000010498.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PJC0	-

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Summary

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