Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX9 ENSECAG00000023712

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Description

paired box 9 [Source:VGNC Symbol;Acc:VGNC:51628]

Location

Primary_assembly 1: 175,135,500-175,154,007 forward strand.

EquCab3.0:CM009148.1

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000071819.2	PAX9-203	8246	411aa	ENSECAP00000052921.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PYT6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000045321.3	PAX9-201	4121	342aa	ENSECAP00000031406.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HDY8	-
ENSECAT00000025471.3	PAX9-202	3438	362aa	ENSECAP00000021189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7BX59	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data