Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: EFCAB11 ENSECAG00000018727

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Description

EF-hand calcium binding domain 11 [Source:VGNC Symbol;Acc:VGNC:17437]

Location

Primary_assembly 24: 33,357,997-33,508,111 reverse strand.

EquCab3.0:CM009171.1

About this gene

This gene has 10 transcripts (splice variants) and 144 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000121796.1	EFCAB11-205	1896	204aa	ENSECAP00000085165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000140148.1	EFCAB11-201	2443	163aa	ENSECAP00000074477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000123318.1	EFCAB11-208	1792	162aa	ENSECAP00000089051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000115926.1	EFCAB11-206	1746	154aa	ENSECAP00000075089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000085960.1	EFCAB11-210	1494	160aa	ENSECAP00000086909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000130557.1	EFCAB11-202	1392	181aa	ENSECAP00000083792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000124513.1	EFCAB11-209	1229	188aa	ENSECAP00000058149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000099883.1	EFCAB11-207	899	168aa	ENSECAP00000060521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000019804.3	EFCAB11-204	815	162aa	ENSECAP00000016233.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6ZA45	-
ENSECAT00000091988.1	EFCAB11-203	681	182aa	ENSECAP00000057752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data