Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FBtr0083392 Patr-1-RA

Description

Protein associated with topo II related - 1

Gene Synonyms

Patr-1

Location

About this transcript

This transcript has 5 exons, is annotated with 32 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0339155	Patr-1-RB	4285	968aa	FBpp0308299	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NN42 Q7KK29 Q9VEN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0083392	Patr-1-RA	3532	968aa	FBpp0082833	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VEN9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,532 bps, Translation length: 968 residues

Version

FBtr0083392

Type

Protein coding

Annotation Method

Feature imported from FlyBase.