Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FBtr0078068 Sf3b1-RA

Description

Splicing factor 3b subunit 1

Gene Synonyms

Sf3b1

Location

About this transcript

This transcript has 3 exons, is annotated with 22 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0332340	Sf3b1-RB	4346	1340aa	FBpp0304617	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPR5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0078068	Sf3b1-RA	4155	1340aa	FBpp0077728	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V5E9 Q9VPR5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 4,155 bps, Translation length: 1,340 residues

Version

FBtr0078068

Type

Protein coding

Annotation Method

Feature imported from FlyBase.