Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0112853 Shal-RB

Description

Shaker cognate l

Gene Synonyms

Shal

Location

About this transcript

This transcript has 7 exons, is annotated with 49 domains and features and maps to 20 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0112853	Shal-RB	4097	571aa	FBpp0111766	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17971	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0074973	Shal-RA	2587	490aa	FBpp0074741	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
FBtr0333273	Shal-RC	2357	520aa	FBpp0305471	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFP1	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,097 bps, Translation length: 571 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17971

Version

FBtr0112853

Type

Protein coding

Annotation Method

Feature imported from FlyBase.