Transcript: ENSDART00000158540.2 prkcab-202

Description

protein kinase C, alpha, b [Source:ZFIN;Acc:ZDB-GENE-131121-412]

Gene Synonyms

si:ch1073-370j18.1

Location

Chromosome 3: 56,163,276-56,342,119 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 39 domains and features, is associated with 510 variant alleles and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099841.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158540.2	prkcab-202	2356	635aa	ENSDARP00000138087.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000166709.2	prkcab-203	2326	625aa	ENSDARP00000138256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUK0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000157770.2	prkcab-201	350	116aa	ENSDARP00000131870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ54	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,356 bps, Translation length: 635 residues

Version

ENSDART00000158540.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000158540.2 prkcab-202

Summary

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Transcript: ENSDART00000158540.2 prkcab-202

Summary

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