Transcript: ENSDART00000108729.4 ADAMTSL2-201

Description

ADAMTS-like 2 [Source:ZFIN;Acc:ZDB-GENE-070705-558]

Location

Chromosome 5: 65,880,890-65,921,536 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 39 domains and features, is associated with 1006 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074033.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000108729.4	ADAMTSL2-201	6772	899aa	ENSDARP00000100403.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000186601.1	ADAMTSL2-202	396	131aa	ENSDARP00000156783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 6,772 bps, Translation length: 899 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000108729.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000108729.4 ADAMTSL2-201

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Transcript: ENSDART00000108729.4 ADAMTSL2-201

Summary

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