Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: adamtsl2 ENSDARG00000074033

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Description

ADAMTS-like 2 [Source:ZFIN;Acc:ZDB-GENE-070705-558]

Gene Synonyms

ADAMTSL2a, si:rp71-31m18.1

Location

Chromosome 5: 65,880,890-65,921,536 reverse strand.

GRCz11:CM002889.2

About this gene

This gene has 2 transcripts (splice variants), 204 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000108729.4	adamtsl2-201	6772	899aa	ENSDARP00000100403.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RC76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000186601.1	adamtsl2-202	396	131aa	ENSDARP00000156783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QMQ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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