Transcript: ENSDART00000147905.3 selenou1a-204

Description

selenoprotein U 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2459]

Location

Chromosome 13: 18,659,325-18,669,575 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 193 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057378.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188249.1	selenou1a-205	1661	212aa	ENSDARP00000149078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBP3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147905.3	selenou1a-204	1291	212aa	ENSDARP00000115912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBP3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134740.3	selenou1a-202	790	104aa	ENSDARP00000117937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141647.2	selenou1a-203	354	102aa	ENSDARP00000118165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133062.2	selenou1a-201	334	101aa	ENSDARP00000120460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,291 bps, Translation length: 212 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PBP3

Version

ENSDART00000147905.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147905.3 selenou1a-204

Summary

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Transcript: ENSDART00000147905.3 selenou1a-204

Summary

About Us

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