Transcript: ENSDART00000142821.2 YJU2B-202

Description

YJU2 splicing factor homolog B [Source:ZFIN;Acc:ZDB-GENE-040912-36]

Gene Synonyms

ccdc130, zgc:103496

Location

About this transcript

This transcript has 9 exons, is annotated with 3 domains and features, is associated with 281 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060888.8	YJU2B-201	1433	390aa	ENSDARP00000060887.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66I85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169397.2	YJU2B-203	1173	390aa	ENSDARP00000134561.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66I85	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142821.2	YJU2B-202	803	211aa	ENSDARP00000118087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 803 bps, Translation length: 211 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142821.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.