Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ccdc130 ENSDARG00000041533

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Description

coiled-coil domain containing 130 [Source:NCBI gene;Acc:402887]

Gene Synonyms

zgc:103496

Location

Chromosome 22: 26,239,424-26,265,355 reverse strand.

GRCz11:CM002906.2

About this gene

This gene has 3 transcripts (splice variants), 189 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060888.8	ccdc130-201	1433	390aa	ENSDARP00000060887.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66I85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169397.2	ccdc130-203	1173	390aa	ENSDARP00000134561.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIC2 Q66I85	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142821.2	ccdc130-202	803	211aa	ENSDARP00000118087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMU6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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