Transcript: ENSDART00000140337.2 mink1-203

Description

misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]

Gene Synonyms

msn3, si:ch211-147a23.2, zgc:162163

Location

Chromosome 5: 38,329,596-38,342,992 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 466 variant alleles and maps to 206 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035360.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188573.1	mink1-204	8343	1273aa	ENSDARP00000156553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QM71	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000135260.3	mink1-202	4201	1270aa	ENSDARP00000113008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BG87	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000051233.5	mink1-201	1074	156aa	ENSDARP00000051232.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1REC7	-
ENSDART00000140337.2	mink1-203	621	207aa	ENSDARP00000117625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY88	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 621 bps, Translation length: 207 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000140337.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000140337.2 mink1-203

Summary

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Transcript: ENSDART00000140337.2 mink1-203

Summary

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