Transcript: ENSDART00000137663.2 SNRPA-201

Description

small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]

Location

Chromosome 18: 35,405,090-35,407,530 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 16 variant alleles and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000018890.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000012018.9	SNRPA-204	1533	281aa	ENSDARP00000027914.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P2T1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191845.1	SNRPA-203	1285	281aa	ENSDARP00000153873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P2T1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137663.2	SNRPA-201	842	199aa	ENSDARP00000114911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141703.3	SNRPA-202	734	199aa	ENSDARP00000118605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 842 bps, Translation length: 199 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000137663.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000137663.2 SNRPA-201

Summary

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Transcript: ENSDART00000137663.2 SNRPA-201

Summary

About Us

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