Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: snrpa ENSDARG00000018890

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Description

small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]

Gene Synonyms

fc19d01, wu:fc19d01, zgc:77810

Location

Chromosome 18: 35,402,759-35,407,790 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 4 transcripts (splice variants), 230 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000012018.9	snrpa-201	1533	281aa	ENSDARP00000027914.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P2T1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191845.1	snrpa-204	1285	281aa	ENSDARP00000153873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P2T1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137663.2	snrpa-202	842	199aa	ENSDARP00000114911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V3H3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141703.3	snrpa-203	734	199aa	ENSDARP00000118605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V3H3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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