Transcript: ENSDART00000166143.2 si:dkey-152b24.6-203

Description

si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]

Location

Chromosome 16: 46,577,257-46,579,936 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 38 variant alleles and maps to 139 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000105043.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131061.3	si:dkey-152b24.6-202	1183	290aa	ENSDARP00000110443.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6Q4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127212.3	si:dkey-152b24.6-201	1142	290aa	ENSDARP00000108686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6Q4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166143.2	si:dkey-152b24.6-203	713	143aa	ENSDARP00000138233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQM0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 713 bps, Translation length: 143 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000166143.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000166143.2 si:dkey-152b24.6-203

Summary

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Transcript: ENSDART00000166143.2 si:dkey-152b24.6-203

Summary

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