Transcript: ENSDART00000159622.2 cfh-202

Description

complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]

Gene Synonyms

im:7147412, si:ch211-207o17.2

Location

Chromosome 22: 23,655,705-23,668,363 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 48 domains and features, is associated with 172 variant alleles and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100442.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167106.2	cfh-204	2997	901aa	ENSDARP00000136634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IPQ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000163228.2	cfh-203	3412	896aa	ENSDARP00000137998.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4INN0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000159622.2	cfh-202	1838	603aa	ENSDARP00000140648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITL4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000158665.2	cfh-201	708	236aa	ENSDARP00000131647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFM0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,838 bps, Translation length: 603 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000159622.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000159622.2 cfh-202

Summary

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Transcript: ENSDART00000159622.2 cfh-202

Summary

About Us

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