Transcript: ENSDART00000160293.2 polr2b-202

Description

polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]

Gene Synonyms

zgc:109952

Location

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 441 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160293.2	polr2b-202	1345	366aa	ENSDARP00000137138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000167045.3	polr2b-204	6508	1174aa	ENSDARP00000142035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXL0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162719.2	polr2b-203	1764	562aa	ENSDARP00000137902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRH1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167276.2	polr2b-205	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000157647.2	polr2b-201	360	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,345 bps, Translation length: 366 residues

Version

ENSDART00000160293.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.