Transcript: ENSDART00000166697.2 srsf11-203

Description

serine and arginine rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]

Location

Chromosome 11: 45,392,211-45,394,780 forward strand.

About this transcript

This transcript has 5 exons, is associated with 38 variant alleles and maps to 63 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098574.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000167826.2	srsf11-204	2179	461aa	ENSDARP00000138275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171274.2	srsf11-207	550	140aa	ENSDARP00000139328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000168691.2	srsf11-205	615	91aa	ENSDARP00000134255.1	Nonsense mediated decay	-
ENSDART00000161732.2	srsf11-202	626	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000166697.2	srsf11-203	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000169036.2	srsf11-206	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000159764.2	srsf11-201	600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 436 bps,

Version

ENSDART00000166697.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000166697.2 srsf11-203

Summary

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Transcript: ENSDART00000166697.2 srsf11-203

Summary

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