Transcript: ENSDART00000139130.2 zgc:162509-203

Description

zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]

Gene Synonyms

im:7160392

Location

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 375 variant alleles and maps to 153 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059926.4	zgc:162509-202	2067	688aa	ENSDARP00000059925.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139130.2	zgc:162509-203	667	177aa	ENSDARP00000123537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBR3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 667 bps, Translation length: 177 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000139130.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.