Transcript: ENSDART00000173557.2 kdm6ba-202

Description

lysine (K)-specific demethylase 6B, a [Source:ZFIN;Acc:ZDB-GENE-091005-1]

Gene Synonyms

jmjd3b

Location

About this transcript

This transcript has 5 exons, is associated with 1808 variant alleles and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173641.2	kdm6ba-203	8578	1996aa	ENSDARP00000142796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127719.3	kdm6ba-201	1578	525aa	ENSDARP00000110911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6X8	-
ENSDART00000173992.2	kdm6ba-204	855	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000173557.2	kdm6ba-202	706	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 706 bps,

Version

ENSDART00000173557.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]