Transcript: ENSDART00000172989.2 bsnb-203

Description

bassoon (presynaptic cytomatrix protein) b [Source:ZFIN;Acc:ZDB-GENE-120628-1]

Gene Synonyms

zmp:0000001201

Location

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 2346 variant alleles and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109753.5	bsnb-201	11090	3380aa	ENSDARP00000103739.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000127184.3	bsnb-202	10697	3305aa	ENSDARP00000108852.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QTK1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172989.2	bsnb-203	619	206aa	ENSDARP00000142420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGP1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 619 bps, Translation length: 206 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000172989.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]