Transcript: ENSDART00000169193.2 si:ch211-57n23.4-202

Description

si:ch211-57n23.4 [Source:ZFIN;Acc:ZDB-GENE-140106-153]

Gene Synonyms

zmp:0000001193

Location

About this transcript

This transcript has 7 exons, is annotated with 23 domains and features, is associated with 646 variant alleles and maps to 39 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112364.5	si:ch211-57n23.4-201	2169	722aa	ENSDARP00000100059.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FH26	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169193.2	si:ch211-57n23.4-202	1184	325aa	ENSDARP00000141487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZR9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,184 bps, Translation length: 325 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000169193.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.