Transcript: ENSDART00000124562.3 zgc:152977-202

Description

zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]

Location

About this transcript

This transcript has 21 exons, is annotated with 19 domains and features, is associated with 858 variant alleles and maps to 183 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000106163.5	zgc:152977-201	2006	574aa	ENSDARP00000096941.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4S0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000124562.3	zgc:152977-202	3024	840aa	ENSDARP00000106535.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB83	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152806.2	zgc:152977-204	769	220aa	ENSDARP00000126798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GE85	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152672.3	zgc:152977-203	620	207aa	ENSDARP00000127001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GET8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 3,024 bps, Translation length: 840 residues

Version

ENSDART00000124562.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non-submitted evidence [Definitions]