Transcript: ENSDART00000159055.2 traj39-202

Description

T-cell receptor alpha joining 39 [Source:ZFIN;Acc:ZDB-GENE-170601-47]

Gene Synonyms

si:dkey-161l11.26, zmp:0000000779

Location

About this transcript

This transcript has 1 exon, is associated with 281 variant alleles and maps to 22 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113547.3	traj39-201	903	130aa	ENSDARP00000099340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000159055.2	traj39-202	66	22aa	ENSDARP00000136649.1	Joining chain T cell receptor gene that undergoes somatic recombination before transcriptionTR J gene	A0A0R4IQJ6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 66 bps, Translation length: 22 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000159055.2

Type

TR J gene

Annotation Method

Immunoglobulin (Ig) and T-cell receptor (TcR) annotation imported from the manually curated IG gene set from the Havana project.