Transcript: ENSDART00000172387.2 col7a1l-203

Description

collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]

Gene Synonyms

cb483, col7a1b, sb:cb483, si:dkey-117n7.1

Location

About this transcript

This transcript has 90 exons, is annotated with 93 domains and features, is associated with 1035 variant alleles and maps to 188 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172387.2	col7a1l-203	6906	2302aa	ENSDARP00000139596.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141566.3	col7a1l-202	5167	1722aa	ENSDARP00000118733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKQ2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000101592.3	col7a1l-201	1770	589aa	ENSDARP00000092365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q960	-

Summary

Statistics

Exons: 90, Coding exons: 90, Transcript length: 6,906 bps, Translation length: 2,302 residues

Version

ENSDART00000172387.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.