Transcript: ENSDART00000153961.2 shisal1b-202

Description

shisa like 1b [Source:ZFIN;Acc:ZDB-GENE-131121-331]

Gene Synonyms

shisal1, si:ch73-66d24.2

Location

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 479 variant alleles and maps to 40 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000097520.4	shisal1b-201	1614	207aa	ENSDARP00000088291.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBL6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153961.2	shisal1b-202	594	109aa	ENSDARP00000129077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WFS2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 594 bps, Translation length: 109 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153961.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.