Transcript: ENSDART00000154871.2 si:ch211-15d5.11-202

Description

si:ch211-15d5.11 [Source:ZFIN;Acc:ZDB-GENE-131121-177]

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 282 variant alleles and maps to 15 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000153725.3	si:ch211-15d5.11-201	3585	653aa	ENSDARP00000128169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WD72	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154871.2	si:ch211-15d5.11-202	517	172aa	ENSDARP00000128630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEH9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 517 bps, Translation length: 172 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000154871.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.